List of Participants in UEFA Cup 1988-1989 (64 clubs)
| Club | Country | Participant as.. | M | W | D | L | GF | GA | GD |
|---|---|---|---|---|---|---|---|---|---|
| First Vienna FC 1894 |  AUT | 4 | 2 | 0 | 2 | 4 | 4 | ±0 | |
| Austria Wien | AUT | 4 | 1 | 1 | 2 | 5 | 5 | ±0 | |
| SK Sturm Graz | AUT | 2 | 0 | 1 | 1 | 0 | 1 | -1 | |
| KSV Waregem |  BEL | 4 | 2 | 1 | 1 | 8 | 6 | +2 | |
| Royal Antwerp FC | BEL | 2 | 0 | 0 | 2 | 3 | 6 | -3 | |
| RFC Liege | BEL | 6 | 3 | 1 | 2 | 14 | 5 | +9 | |
| Slavia Sofia |  BUL | 2 | 0 | 0 | 2 | 0 | 10 | -10 | |
| Trakia Plovdiv | BUL | 3rd place | 2 | 0 | 1 | 1 | 1 | 2 | -1 |
| APOEL |  CYP | 2 | 0 | 0 | 2 | 2 | 6 | -4 | |
| DAC Dunajska Streda |  CZ | 3rd place | 4 | 1 | 0 | 3 | 7 | 7 | ±0 |
| Dukla Prague | CZ | Vice-champion | 2 | 1 | 0 | 1 | 4 | 4 | ±0 |
| Ikast FS |  DEN | 2 | 1 | 0 | 1 | 2 | 2 | ±0 | |
| TPS Turku |  FIN | 6 | 2 | 2 | 2 | 6 | 6 | ±0 | |
| Montpellier HSC |  FRA | 3rd place | 2 | 0 | 0 | 2 | 1 | 6 | -5 |
| Girondins Bordeaux | FRA | Vice-champion | 6 | 3 | 2 | 1 | 5 | 3 | +2 |
| 1. FC Lokomotiv Leipzig |  GDR | Vice-champion | 4 | 2 | 1 | 1 | 8 | 3 | +5 |
| Dynamo Dresden | GDR | 3rd place | 10 | 5 | 3 | 2 | 17 | 6 | +11 |
| VfB Stuttgart |  GER | 4th place | 12 | 6 | 3 | 3 | 19 | 12 | +7 |
| Bayer 04 Leverkusen | GER | Defending champion | 2 | 0 | 0 | 2 | 0 | 2 | -2 |
| FC Bayern Munich | GER | Vice-champion | 10 | 6 | 1 | 3 | 22 | 13 | +9 |
| 1. FC Koeln | GER | 3rd place | 6 | 3 | 2 | 1 | 11 | 7 | +4 |
| 1. FC Nuremberg | GER | 5th place | 2 | 1 | 0 | 1 | 3 | 4 | -1 |
| PAOK |  GRE | 4th place | 2 | 0 | 1 | 1 | 1 | 2 | -1 |
| AEK Athens | GRE | 3rd place | 2 | 1 | 0 | 1 | 1 | 2 | -1 |
| Tatabanyai Banyasz SC |  HUN | 2 | 1 | 0 | 1 | 2 | 3 | -1 | |
| Ujpesti Dozsa | HUN | 4 | 1 | 1 | 2 | 2 | 3 | -1 | |
| IA Akranes |  ISL | 2 | 0 | 1 | 1 | 1 | 2 | -1 | |
| St Patrick's Athletic |  IRL | 2 | 0 | 0 | 2 | 0 | 4 | -4 | |
| Juventus |  ITA | Domestic cup (semi-final) | 8 | 5 | 0 | 3 | 16 | 8 | +8 |
| AS Roma | ITA | 3rd place | 6 | 2 | 0 | 4 | 8 | 11 | -3 |
| Inter Milan | ITA | 5th place | 6 | 4 | 1 | 1 | 9 | 6 | +3 |
| Napoli | ITA | Vice-champion | 12 | 6 | 5 | 1 | 18 | 10 | +8 |
| Union Luxembourg |  LUX | 2 | 0 | 0 | 2 | 1 | 11 | -10 | |
| Sliema Wanderers |  MLT | 2 | 0 | 0 | 2 | 1 | 8 | -7 | |
| FC Groningen |  NED | UEFA Cup Play-off | 6 | 2 | 1 | 3 | 6 | 8 | -2 |
| Ajax Amsterdam | NED | Vice-champion | 2 | 0 | 0 | 2 | 3 | 6 | -3 |
| Linfield |  NIR | 2 | 0 | 2 | 0 | 1 | 1 | ±0 | |
| Molde FK |  NOR | 2 | 0 | 1 | 1 | 1 | 5 | -4 | |
| Legia Warsaw |  POL | 3rd place | 2 | 0 | 0 | 2 | 4 | 10 | -6 |
| GKS Katowice | POL | Vice-champion | 2 | 0 | 0 | 2 | 2 | 5 | -3 |
| Sporting CP |  POR | 4th place | 4 | 2 | 1 | 1 | 7 | 5 | +2 |
| Belenenses | POR | 3rd place | 4 | 2 | 2 | 0 | 2 | 0 | +2 |
| SL Benfica | POR | Vice-champion | 4 | 2 | 1 | 1 | 8 | 4 | +4 |
| Otelul Galati |  ROM | 2 | 1 | 0 | 1 | 1 | 5 | -4 | |
| Victoria Bucharest | ROM | 8 | 4 | 1 | 3 | 14 | 11 | +3 | |
| Aberdeen |  SCO | 4th place | 2 | 0 | 1 | 1 | 0 | 2 | -2 |
| Heart of Midlothian | SCO | Vice-champion | 8 | 5 | 1 | 2 | 10 | 4 | +6 |
| 1. FC Koeln | SCO | 3rd place | 4 | 2 | 1 | 1 | 6 | 5 | +1 |
| Athletic Bilbao |  ESP | 4th place | 4 | 2 | 0 | 2 | 6 | 8 | -2 |
| Atletico Madrid | ESP | 3rd place | 2 | 1 | 0 | 1 | 2 | 2 | ±0 |
| Real Sociedad | ESP | Vice-champion | 8 | 4 | 2 | 2 | 10 | 8 | +2 |
| Malmo FF |  SWE | 4 | 1 | 1 | 2 | 4 | 4 | ±0 | |
| Oesters IF | SWE | 2 | 1 | 0 | 1 | 2 | 6 | -4 | |
| IK Brage | SWE | 2 | 0 | 0 | 2 | 2 | 4 | -2 | |
| FC Aarau |  SUI | 3rd place | 2 | 0 | 0 | 2 | 0 | 7 | -7 |
| Servette FC | SUI | Vice-champion | 4 | 1 | 2 | 1 | 2 | 3 | -1 |
| Besiktas |  TUR | 2 | 1 | 0 | 1 | 1 | 2 | -1 | |
| Dynamo Minsk |  USSR | 5th place | 4 | 2 | 1 | 1 | 4 | 3 | +1 |
| Dnepr Dnepropetrovsk | USSR | Vice-champion | 2 | 0 | 1 | 1 | 2 | 3 | -1 |
| Zalgiris Vilnius | USSR | 3rd place | 2 | 1 | 0 | 1 | 4 | 5 | -1 |
| Torpedo Moscow | USSR | 4th place | 2 | 1 | 0 | 1 | 2 | 3 | -1 |
| FK Velez Mostar |  YUG | 6 | 3 | 2 | 1 | 8 | 6 | +2 | |
| NK Dinamo Zagreb | YUG | 4 | 1 | 1 | 2 | 4 | 5 | -1 | |
| Partizan Belgrade | YUG | 4 | 3 | 0 | 1 | 14 | 4 | +10 |
1987/1988
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