Croatian Prva HNL 1999/2000: final table of First division
| # | Club | M | W | D | L | Goal | Pts | GD | Result | |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NK Dinamo Zagreb | 33 | 23 | 6 | 4 | 83 - 25 | 75 | +58 | 1) |   Champion (Champions League) |
| 2 | Hajduk Split | 33 | 17 | 10 | 6 | 58 - 30 | 61 | +28 | 2) | Vice-champion (Champions League) |
| 3 | NK Osijek | 33 | 15 | 8 | 10 | 55 - 49 | 53 | +6 | UEFA Cup | |
| 4 | NK Rijeka | 33 | 14 | 7 | 12 | 54 - 39 | 49 | +15 | UEFA Cup | |
| 5 | Slaven Belupo | 33 | 12 | 13 | 8 | 34 - 34 | 49 | ±0 | Intertoto Cup | |
| 6 | HNK Cibalia | 33 | 11 | 12 | 10 | 42 - 39 | 45 | +3 | Intertoto Cup | |
| 7 | NK Varteks | 33 | 10 | 10 | 13 | 32 - 44 | 40 | -12 | ||
| 8 | NK Zagreb | 33 | 9 | 12 | 12 | 42 - 49 | 39 | -7 | ||
| 9 | HNK Sibenik | 33 | 8 | 10 | 15 | 33 - 50 | 34 | -17 | ||
| 10 | NK Hrvatski Dragovoljac | 33 | 8 | 9 | 16 | 36 - 58 | 33 | -22 | ||
| 11 | NK Istra | 33 | 7 | 9 | 17 | 32 - 56 | 30 | -24 |  Relegated | |
| 12 | NK Vukovar '91 | 33 | 8 | 6 | 19 | 33 - 61 | 30 | -28 | Relegated | |
| Pts = Points M = Matches played; W = Matches won; D = Matches drawn; L = Matches lost; GD = Goal difference; | ||||||||||
| Notes: 1) Changed name from Croatia to Dinamo on Feb 14, 2000 2) 1 point deducted for fielding suspended player; deduction later revoked. |
Notes:
- Champion
 - national cup holder
- participation in European competition
 - promoted
- relegated
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1998/1999
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